Pseudomonas sp. 45MFCol3.1, G368_RS0125625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00009.9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCATCAGCTGCTCGATGCGATGACGCATCTCGGCAGCGGCCTTGTTGGTGAAGGTCACCGACAGAATGGAGTGGGGCGAGGCGTTTTCGACCTGGATCAA CCAGGCGATACGGTGCACCAGCACTCGGGTTTTGCCGGAGCCAGCACCGGCCAGGACCAACTGACGACCCACGGAGGCAGCTACGGCCTGGCGTTGGGCA TCGTTGAGGGAGTTCAGCAGAAGGGAGAGATCATCGCGCATCGGGGCATTCTAGGGTGCGACGTCACACCGGGCAAACCGAGCTTTGCATTGGCCGATGA AAGAAGCACCGATGACGACCGGTCGGTCACTGGCTGCGAGCAGGGGCGGGGCTCGCCTGGCGGCTTTTACGCCGGATGCGGGCGACTAAAACTTTTGTCT ATTTTATGACCTGAGGCAGTTTGGTCCGGGCATTTGCTTGTGTATGCTCCGTCCACAATTCGGGCTCGCATGCTCAACTATAAGAACAAGAACATCGCCT
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| DNA Sequence for Gene |
>G368_RS0125625
ATGACCCTCAGCTCCGACCTGTCGGGCCCCTCCGTGGAGCCTCGGGCTATCCGCAAACAGTACGCCATGGAGATGGCGGTCGAACGCACGCGTCTGCTGT ACCAGGGCTCGTTATTGCCGACGCTGTTCATGCTGATCAACGGTCTGGTGTGCGCCGGGTTGCTCTGGAGCCCGCAGCGTTACTTCGTGGTCAGCGTCTG GCTGATCTGGTTGTTGTCGCTGGTGGCGTTGCGAGTGATTCAGGTCGCGGCCTTCGATTCGGCGATTCCCAACCGTCAGGCCCATCCGATCTGGCGTCGC ATGTTTCTGCTCGGTTCTGCGATGACCGGTTTGACCCTGGCCGGTGCCGGCATTGCACTGGTGCCCGCTGACAATTTCATCCAGCAAGCCTGGGTGTTCG GTCTGATCGGCGCCGCAGCCCTCTCGGCCAGCGTCGCTTATGCGGTCAGCCTGCCAGCATTTCTATCCTTTACCTTGCCCTGTCTGTTGCCGGCCATCGG CTATCTGTTCTGGGGTGGCGATGAACAGGAGCAGGGCTGGGGCTGGTTCGGGCTGATTCTGCTGGGCTCGTTGAGCGTGGTCGCTTGGCAGGTCAATCGA CTGATCGATCAGGGGTTGCTACGGCGCTTTCAAAATCAGGCGCTGATCGAGCACTTGCAGCAGGCGCAAAGTCGCAGCGAGCAACTCAATCACGAACTGG CCAAGGAAATCGACCAGCGTCGTCGCGCCGAAGACGAGTTGCGCGAAACCCAGGTCGACCTTGAAAACCGGGTCGCCCAACGCAGTCTGGAGCTGGATGC GGCCAACCAGGCCTTGAGCAAGAGCGAAGCGCGGCTGGCGCTGGCGTTGAAGGCGAGCGAACTCGGTTTGTGGGACTGGAACCTGCAGACCGACGAAGTC CATCACACCCAGCTCCAGGAGTTGTTCGGGCTGGAGCCGGAATACGTGACGGCGATGCTCCGCCACCTCAAGCCGAGGCTGCACCCCGACGACTTGCCAG CGCTGAGGCGGGCGCTGGTCGAGCATTTGAAGGGCCGCACCGAGGATTATCAGATCGAGTACCGGGTGCGACATGGCGATGGCCATTGGGTCTGGATCGA GGACCGTGGTCGAGCGGTCGAGCGTAGCGAAAACGGCCGGGTGATCCGCATGGTCGGCACCCGCCGCGATATCAGCGCCAGCAAGCACCTGGAAGAACAG CGCCAACTGGCAGCGACGGTGTTCGAGGCGGCCAGCGAAGGCATTGTGATTTTCGACCCGAATTACGCGCTGATCGCCGTCAATCAAGCCTTCAGTCGGG TAACTGGCTATGAAATCGGCGACATGCTTGGGCGCAACGTGGTCGATTTACCCTGCAGCCGCGATGCCCGTCGGCATTACGCGGCGATTCGTCAGGCGCT GGAGCAGCACGGTAGTTGGCAGGGCGAATTGGTCGAGACCCGCAAGAATGGCGAGTTGTATCCGCAGTGGCTGCAACTGAATGCCGTGCGCGATATGCGG GGAAATGTCAGTCATATCGTCGGCTTCTTCGCCGATCTCTCTGCTCGGCGTGAATCCGAAGAGCGTATGCGCTACCTCGCCCATTACGACGAGCTCACGG GGCTGGCCAACCGTTCGTTGTTCCGTGAACGACTGAGCGAGGCTCATCAGCGGGTGCGCCAGGGCGGTCGGCGCAGCCTGGCGTTGCTGCACATCAATCT GGATCGCTTCAAGCTGCTCAACGACAGCCTCGGCCACGAAATCGCCGATCAGCTGTTACAGAAAATGGCCCGGCGGTTGGTCAATGCGTTGCCGGAAGCG GACACCATCGCCCGGTTGTCCGGCGATGAATTTGCGGTGCTGTTCGACGCCTACGGCAACCTGTCGAGCCTGGCGCGAGTGGCGACCCGATTGTCGACCA AGCTGCGTTTGCCGATCACCGTCGAGGGGCATGAACTGGTGATGAGCGCGTCCATGGGCATCAGCCTGTTGCCGGACACCGCGCGGGAGATTTCCGCGCT GGTCAGCCAGTCGAACATGGCCATGCAGCATGCCAAACACTTGGGCGGCAACAACTTCCAGTTCTACACCGACAGCCTGCAGGCCAGCACGCTCGAGCGT TTGCAGCTTGAGAACCAATTGCGCAAAGCCATCGAAGAAAAGCAGTTGAAGGTGTTTTATCAACCGAAACTCTGCCTCGCCACCGGCCGGTTGAATGCCG CCGAAGCGCTGGTGCGCTGGAATCACCCGACCCTTGGCCAGGTACCGCCGGGGGATTTCATCGGTCTGGCCGAGGAAACCGGCCTGATCAACGCTATCGG CGAGTTCGTATTGCGTCAGGCCTGCTGGCAAGCCTGCGAATGGCAGCGTCAGGGGCTTGAGCCGATTCGGGTGTCGGTCAATCTGTCGGTGCATCAACTG CGTCAGGGGAAACTCGTCAGCCTGGTGCGCCAGGTGCTGGAGGAAACCGGTCTGGCGCCGCACTACCTGGAACTGGAACTTACCGAGAGCCAGTTGCTGG ACAGCGTCGAGCACATCATCGCGACCTTCCAGCAATTGCGCGATCTGGGGGTGAAGCTGGCGATCGACGATTTTGGTACAGGTTATTCGTCTCTGAGTTA TCTGAAACGGATTCCGGTGGACTACGTGAAGATCGATCAGGCATTTATCCGCGGGCTGGGGGAGAGCAGTGAAGATGCAGCGATCACCCGGGCGATCATT GCCATGGCCCATGGTCTGTCGTTGAAAGTGGTGGCTGAAGGGGTCGAGCGACCGGAGCAGTTGGAGTTTCTGAAGGTCGAGCGTTGCGATGAAGTGCAGG GTTATTGGATCAGCCGTCCGGTTGAGGCCGCGGACCTGGCCGAGCTTTTACGCGCAGACGAAAAAACCTCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGCTACATGGAGCATATGTCGCGTGAAACGGGGACATTGAGTTACGCATTGAGCAGGCAAAAAGCCGATTCATGTAGTATAACTACAAGCGTGCTACAT CCCCGGCAACTGCCAATAACAAAGAGTCCAGCCCCTTGAATCTGCTGCAACACATCGCCCAGTCACGCCACCTGTTACGCAAGTCGGAGCTCAAGGTCGC CGACCACGTGCTGCTTGATCCTGCGGCGGTGATGCACAGTTCCATGGCCGACCTGGCCCACAGCGTAGGCATCAGCGAGCCGACCATCGTGCGGTTTTGC CGCGCCATCGGTTGCTCCGGGTTCCAGGATTTGAAACTGAAGCTGGCGCAGAGCCTGGCGGCTGGCGCGAGCTTCGGGCAATTCGCGATCCATGAAGACG ATTCGGTTGCCGATTACAGCCTGAAAATCTTCGACACTACCCTGCACACCCTGATGGAAGTTCGCGAGAAACTTGACCCGGTAGCGTTGCAGAAAGCCGT
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| Amino Acid Sequence |
>diguanylate cyclase
MTLSSDLSGPSVEPRAIRKQYAMEMAVERTRLLYQGSLLPTLFMLINGLVCAGLLWSPQRYFVVSVWLIWLLSLVALRVIQVAAFDSAIPNRQAHPIWRR MFLLGSAMTGLTLAGAGIALVPADNFIQQAWVFGLIGAAALSASVAYAVSLPAFLSFTLPCLLPAIGYLFWGGDEQEQGWGWFGLILLGSLSVVAWQVNR LIDQGLLRRFQNQALIEHLQQAQSRSEQLNHELAKEIDQRRRAEDELRETQVDLENRVAQRSLELDAANQALSKSEARLALALKASELGLWDWNLQTDEV HHTQLQELFGLEPEYVTAMLRHLKPRLHPDDLPALRRALVEHLKGRTEDYQIEYRVRHGDGHWVWIEDRGRAVERSENGRVIRMVGTRRDISASKHLEEQ RQLAATVFEAASEGIVIFDPNYALIAVNQAFSRVTGYEIGDMLGRNVVDLPCSRDARRHYAAIRQALEQHGSWQGELVETRKNGELYPQWLQLNAVRDMR GNVSHIVGFFADLSARRESEERMRYLAHYDELTGLANRSLFRERLSEAHQRVRQGGRRSLALLHINLDRFKLLNDSLGHEIADQLLQKMARRLVNALPEA DTIARLSGDEFAVLFDAYGNLSSLARVATRLSTKLRLPITVEGHELVMSASMGISLLPDTAREISALVSQSNMAMQHAKHLGGNNFQFYTDSLQASTLER LQLENQLRKAIEEKQLKVFYQPKLCLATGRLNAAEALVRWNHPTLGQVPPGDFIGLAEETGLINAIGEFVLRQACWQACEWQRQGLEPIRVSVNLSVHQL RQGKLVSLVRQVLEETGLAPHYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVDYVKIDQAFIRGLGESSEDAAITRAII AMAHGLSLKVVAEGVERPEQLEFLKVERCDEVQGYWISRPVEAADLAELLRADEKTS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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