Pseudomonas sp. CFT9, CFT9_22348
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. CFT9
GCF_000416255.1|latest |
| Locus Tag |
CFT9_22348
|
| NCBI Locus Tag | CFT9_RS06195 |
| Name |
|
| Replicon | soap_scaffs_T9.Contig57 |
| Genomic location | 9579 - 11525 (+ strand) |
Cross-References
| RefSeq | WP_019819858.1 |
| GI | 518658046 |
| NCBI Locus Tag | CFT9_RS06195 |
| NCBI Old Locus Tag | CFT9_22348 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
diguanylate cyclase/phosphodiesterase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.97 |
| Kyte-Doolittle Hydrophobicity Value | -0.070 |
| Molecular Weight (kDa) | 72.0 |
| Isoelectric Point (pI) | 6.34 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3PJV | LYASE | 11/10/10 | Structure of Pseudomonas fluorescence LapD periplasmic domain | Pseudomonas fluorescens | 1.7727 | X-RAY DIFFRACTION | 92.3 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001350 (454 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: CFT9_22348
Search term: diguanylate cyclase/phosphodiesterase
|
Human Homologs
References
No references are associated with this feature.