Pseudomonas sp. CFT9, CFT9_04416
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. CFT9
GCF_000416255.1|latest |
| Locus Tag |
CFT9_04416
|
| NCBI Locus Tag | CFT9_RS23420 |
| Name |
|
| Replicon | soap_scaffs_T9.Contig9 |
| Genomic location | 66825 - 67937 (+ strand) |
Cross-References
| RefSeq | WP_019817066.1 |
| GI | 518653687 |
| NCBI Locus Tag | CFT9_RS23420 |
| NCBI Old Locus Tag | CFT9_04416 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
histone deacetylase family protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.57 |
| Kyte-Doolittle Hydrophobicity Value | -0.064 |
| Molecular Weight (kDa) | 39.7 |
| Isoelectric Point (pI) | 6.10 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001890 (353 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: CFT9_04416
Search term: histone deacetylase family protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
E-value:
5.0e-33
Percent Identity:
35.0
|
References
No references are associated with this feature.