Pseudomonas sp. CFT9, CFT9_00080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. CFT9
GCF_000416255.1|latest |
| Locus Tag |
CFT9_00080
|
| NCBI Locus Tag | CFT9_RS27575 |
| Name |
|
| Replicon | soap_scaffs_T9.Contig1 |
| Genomic location | 20581 - 21342 (- strand) |
Cross-References
| RefSeq | WP_014717758.1 |
| GI | 504530656 |
| NCBI Locus Tag | CFT9_RS27575 |
| NCBI Old Locus Tag | CFT9_00080 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
short-chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.41 |
| Kyte-Doolittle Hydrophobicity Value | 0.408 |
| Molecular Weight (kDa) | 25.9 |
| Isoelectric Point (pI) | 5.73 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000180 (2633 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: CFT9_00080
Search term: short-chain dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value:
1.3e-27
Percent Identity:
34.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value:
1.3e-27
Percent Identity:
34.8
|
References
No references are associated with this feature.