Pseudomonas sp. CF149, CF149_21138 (gyrB)

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_21138
NCBI Locus Tag	CF149_RS20880
Name	gyrB
Replicon	soap_scaffs_149.Contig43
Genomic location	56356 - 58773 (- strand)

Cross-References

RefSeq	WP_019828641.1
GI	518666942
INSDC	EPJ91576.1
NCBI Locus Tag	CF149_RS20880
NCBI Old Locus Tag	CF149_21138
UniParc	UPI000356EA00
UniProtKB Acc	S6JCT8
UniProtKB ID	S6JCT8_9PSED
UniRef100	UniRef100_S6JCT8
UniRef50	UniRef50_P13364
UniRef90	UniRef90_Q4KKS7

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA gyrase subunit B
Synonyms
Evidence for Translation
Charge (pH 7)	-17.00
Kyte-Doolittle Hydrophobicity Value	-0.383
Molecular Weight (kDa)	90.4
Isoelectric Point (pI)	5.58

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000004 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_21138 Search term: gyrB Search term: DNA gyrase subunit B

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000411532 DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989] E-value: 1.9e-32 Percent Identity: 25.6

References