Pseudomonas sp. CF149, CF149_19526

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_19526
NCBI Locus Tag	CF149_RS19285
Name
Replicon	soap_scaffs_149.Contig40
Genomic location	275740 - 276807 (+ strand)

Cross-References

RefSeq	WP_019828289.1
GI	518666587
INSDC	EPJ92188.1
NCBI Locus Tag	CF149_RS19285
NCBI Old Locus Tag	CF149_19526
UniParc	UPI0003571A7F
UniProtKB Acc	S6J3A9
UniProtKB ID	S6J3A9_9PSED
UniRef100	UniRef100_S6J3A9
UniRef50	UniRef50_G8PZD9
UniRef90	UniRef90_S6J3A9

Product

Feature Type	CDS
Coding Frame	1
Product Name	RND efflux transporter
Synonyms
Evidence for Translation
Charge (pH 7)	-0.61
Kyte-Doolittle Hydrophobicity Value	-0.266
Molecular Weight (kDa)	38.5
Isoelectric Point (pI)	6.80

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000155 (490 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_19526 Search term: RND efflux transporter

Human Homologs

References