Pseudomonas sp. CF149, CF149_10008

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. CF149
GCF_000416155.1|latest
Locus Tag
CF149_10008
NCBI Locus TagCF149_RS09905
Name
Replicon soap_scaffs_149.Contig13
Genomic location 133135 - 134943 (+ strand)

Cross-References

RefSeq WP_019825392.1
GI 518663664
INSDC EPJ94147.1
NCBI Locus Tag CF149_RS09905
NCBI Old Locus Tag CF149_10008
UniParc UPI00035784F0
UniProtKB Acc S6HUZ6
UniProtKB ID S6HUZ6_9PSED
UniRef100 UniRef100_S6HUZ6
UniRef50 UniRef50_Q9HUG8
UniRef90 UniRef90_S6HUZ6

Product

Feature Type CDS
Coding Frame 1
Product Name
Lipid A export ATP-binding/permease protein MsbA
Synonyms
Evidence for Translation
Charge (pH 7) 1.38
Kyte-Doolittle Hydrophobicity Value 0.166
Molecular Weight (kDa) 66.5
Isoelectric Point (pI) 7.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004607 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: CF149_10008

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 2.8e-81
Percent Identity: 34.4
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 2.8e-81
Percent Identity: 34.4
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 2.8e-81
Percent Identity: 34.4

References

No references are associated with this feature.