Pseudomonas sp. CF149, CF149_10008

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF149 soap_scaffs_149.Contig13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCAGCCCCAGAACAGCATCAGCAGGTGCAGGGCAGGCTTGAGCGAGCCCAAGAAGTCTTCTTCGCCGTTAGTCCACATCAGGCTGGCCATCGCCCAGGC GGCAAATAGCATGAAGCCGAGGACTATCGGGTCACGCAGGATTTCTTTCAGCTCCCTGGGCCGCAAGATAATCGCAATAAGGGTCGGAATACTGAACAGG CCGTAATACAACTTGTGATGCAGACTGCGCCCGGGCAGGAAATAAAGGTCGGAGAGGAGTAATAAAAGGCCGACAGGGAGTAGCCACAGGCAGATGAAAT CAAACACCCGCTGCTTTGAATAATTTAAGTAACTGAATTGCATGCTGAAAGGTTCATTCCAGGTTTTGGACGGCCATACTAGCGTACTGGCCCTGAAGTG TCGTTTTTACTGCCCTGCGAGGCCGGGCTTCAAGCGGCAGTCAGTACACCAGAGAAGCTGTGATAAAGTCAGCTTCCTTTTTTACTAACCGCCGCGTGAT
DNA Sequence for Gene
>CF149_10008
ATGACCGAATCCAGCCCCAGCACAAGCGAATCGAGCTTGAAGATATATCTGCGCCTGCTCAGCTATGTCCGGCCTTATGTCGGCCTGTTCCTGCTGAGCA TCCTCGGGTTTCTTATTTTCGCTTCGACCCAGCCAATGCTTGGTTACATCCTCAAGTATTTCGTCGATGGCCTGTCCAATCCGGACGCAGTGCTGTTTCC CACTATTCCTTATTTGCGTGATCTGCGCCTCTTGCAGGTCGTGCCGATACTGATCGTATTGATCGCCGCATGGCAGGGCCTGGGCTCCTTCCTGGGCAAC TACTTCCTGGCCAAGGTGTCATTGGGCCTGGTGCATGACTTGCGGGTCCAGCTGTTCAACAACCTGCTGGTACTGCCCAACCGCTACTTTGACAAGCACA ACTCCGGCCATCTGATCTCCCGTATCACCTTCAACGTGACCATGGTTACTGGCGCTGCCACCGATGCGATCAAGGTCGTTATCCGTGAAGGCATGACCGT TGTGTTCCTGTTTGGCTCGTTGCTGTGGATGAACTGGCGCCTGACGCTGGTGATGGTTGCGATCCTGCCGCTGATTGCAGTCATGGTGAGTACGGCCAGC AAGAAATTCCGCAAGCAAAGCAAGAAAATCCAGGTGGCGATGGGCGACGTGACACACGTCGCCTCGGAAACCATCCAGGGTTATCGCGTTGTACGCAGCT TTGGTGGTGAAGCCTACGAGCAAAAACGCTTTCTGGAAGCCAGTCAGAGCAACACTGACAAGCAACTGCGCATGACCCGCACCGGGGCGATTTATACCCC GATGTTGCAACTGGTCATCTACGTGGCCATGGGCGTCCTGATGTTCCTGGTGCTGTACCTCCGCGGCGATGCCTCGGCAGGCGACATGATTGCCTACATC ACCCTGGCAGGTTTGCTGCCCAAGCCGATTCGTCAGCTGTCTGAAGTCAGCTCGACAATCCAGAAGGGTGTGGCCGGCGCTGAAAGCATCTTTGAGCAAC TGGACGAACAACCTGAAGTCGACACCGGCACTGTTGAGCGCGACCACGTCAGCGGTCGTCTTGACGTGCGTAACCTCAACTTCACCTACCCTGACACAGA CCGTCAGGTGCTCAAGGACGTGACTTTCACGGCCGAGCCGGGGCAAATGGTGGCGCTGGTGGGGCGTTCCGGCAGCGGCAAGTCGACACTGGCGAACCTG ATCCCGCGCTTCTATCACCACACGTCGGGCGAAATTCTGCTCGATGGCGTTGATATCGAAGATTACCGCCTGCTTAACCTGCGTCGACATATTGCCCAGG TGACTCAGCATGTGACCCTGTTCAGCGACACCGTGGCCAACAACATCGCCTATGGCGATCTGGCAGGTGCTCCCCGTGCCGATATCGAAAAAGCCGCGCG TGATGCCTACGCGATGGACTTTATCGAGCAATTGCCGCAAGGCCTGGACACTCAGGTCGGCGAGAACGGCGTGCTGCTTTCCGGCGGTCAACGCCAGCGT CTGGCGATTGCCCGGGCGTTGCTCAAAAACGCGCCGTTGCTGATCCTCGATGAGGCCACCTCGGCGCTGGATACCGAGTCTGAGCGTCATATCCAGGCAG CCCTCGACCACGTCATGAAGGGTCGTACTACCCTGGTGATCGCTCACCGCCTGACAACCATCGAGAAAGCCGACCTGATCCTGGTCATGGATCAGGGCCA GATTGTCGAGCGCGGCACCCATGCCGAGTTGATGGCGTTAAACGGCTACTACGCGCGTCTTCACTCAATGGGCCTTGATGCCCCGCAAACCTCTGGCGAT ATCGCCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CATTGTGTAGCCGCTGGCGAATACTTCGGCAGCGGCTACACAACACTTTCGCTTTGCCTGATTCTCATTCGCTGCGATTAATACCGTGAACTGACCTGCG TTCACCCTGTGTTAATATCGCGCCCCTGTTCATTTTGTATGTGGGATCTCCATGAAGTTGTCCATGCCGCGATTCGATCAAGCCCCTGTCTTGGTGGTAG GCGATGTCATGCTCGACCGTTATTGGCATGGCGGGACCTCACGGATTTCCCCTGAGGCGCCGGTGCCGGTGGTCAAGGTCGAGCAAATCGAAGACCGTCC AGGCGGCGCTGCCAACGTTGCGCTCAACATTGCCGCACTGGGTGCGCCTGCCTCACTGGTCGGTGTGACCGGCGACGATGAAGCCGCCGACAGCCTGGCC AATCGGCTTGAAGGCGCCGGTGTTCGTGCACTGTTCCAGCGTATCGCGCATCAGCCGACCATCGTTAAGTTGCGGGTCATGAGCCGTCACCAGCAACTGC
Amino Acid Sequence
>Lipid A export ATP-binding/permease protein MsbA
MTESSPSTSESSLKIYLRLLSYVRPYVGLFLLSILGFLIFASTQPMLGYILKYFVDGLSNPDAVLFPTIPYLRDLRLLQVVPILIVLIAAWQGLGSFLGN YFLAKVSLGLVHDLRVQLFNNLLVLPNRYFDKHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVVFLFGSLLWMNWRLTLVMVAILPLIAVMVSTAS KKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQKRFLEASQSNTDKQLRMTRTGAIYTPMLQLVIYVAMGVLMFLVLYLRGDASAGDMIAYI TLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEQPEVDTGTVERDHVSGRLDVRNLNFTYPDTDRQVLKDVTFTAEPGQMVALVGRSGSGKSTLANL IPRFYHHTSGEILLDGVDIEDYRLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPRADIEKAARDAYAMDFIEQLPQGLDTQVGENGVLLSGGQRQR LAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMKGRTTLVIAHRLTTIEKADLILVMDQGQIVERGTHAELMALNGYYARLHSMGLDAPQTSGD IA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site