Pseudomonas sp. CF149, CF149_09943

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_09943
NCBI Locus Tag	CF149_RS09840
Name
Replicon	soap_scaffs_149.Contig13
Genomic location	112787 - 113521 (+ strand)

Cross-References

RefSeq	WP_019825369.1
GI	518663641
INSDC	EPJ94134.1
NCBI Locus Tag	CF149_RS09840
NCBI Old Locus Tag	CF149_09943
UniParc	UPI00035720C4
UniProtKB Acc	S6JJZ0
UniProtKB ID	S6JJZ0_9PSED
UniRef100	UniRef100_S6JJZ0
UniRef50	UniRef50_G8Q3T8
UniRef90	UniRef90_M5QZS9

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative lipopolysaccharide core biosynthesis protein
Synonyms
Evidence for Translation
Charge (pH 7)	13.79
Kyte-Doolittle Hydrophobicity Value	-0.581
Molecular Weight (kDa)	28.7
Isoelectric Point (pI)	10.03

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004615 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_09943 Search term: putative lipopolysaccharide core biosynthesis protein

Human Homologs

References