Pseudomonas syringae BRIP39023, A988_24649 (ligA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae BRIP39023
GCF_000333995.1|latest |
| Locus Tag |
A988_24649
|
| NCBI Locus Tag | A988_RS01090 |
| Name |
ligA
|
| Replicon | scaffold21 |
| Genomic location | 138117 - 140480 (- strand) |
Cross-References
| RefSeq | WP_004413950.1 |
| GI | 490548827 |
| EC Number | 6.5.1.2 |
| NCBI Locus Tag | A988_RS01090 |
| NCBI Old Locus Tag | A988_24649 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
NAD-dependent DNA ligase LigA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -17.83 |
| Kyte-Doolittle Hydrophobicity Value | -0.201 |
| Molecular Weight (kDa) | 86.3 |
| Isoelectric Point (pI) | 5.18 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003829 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: A988_24649
Search term: ligA
Search term: NAD-dependent DNA ligase LigA
|
Human Homologs
References
No references are associated with this feature.