Pseudomonas putida S610, EDP1_870 (clpP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S610
GCF_000497385.1|latest |
| Locus Tag |
EDP1_870
|
| NCBI Locus Tag | EDP1_RS18765 |
| Name |
clpP
|
| Replicon | EDP1.NODE_1923 |
| Genomic location | 12480 - 13121 (+ strand) |
Cross-References
| RefSeq | WP_023536171.1 |
| GI | 558881107 |
| NCBI Locus Tag | EDP1_RS18765 |
| NCBI Old Locus Tag | EDP1_870 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.90 |
| Kyte-Doolittle Hydrophobicity Value | -0.124 |
| Molecular Weight (kDa) | 23.5 |
| Isoelectric Point (pI) | 5.63 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003596 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: EDP1_870
Search term: clpP
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:HGNC:2084]
E-value:
1.1e-61
Percent Identity:
58.3
|
References
No references are associated with this feature.