Pseudomonas sp. M47T1, PMM47T1_26478 (fliR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. M47T1
GCF_000263855.1|latest
Locus Tag
PMM47T1_26478
Name
fliR
Replicon contig036
Genomic location 20565 - 21350 (- strand)

Cross-References

RefSeq WP_008374855.1
GI 495650276
INSDC EIK93509.1
NCBI Locus Tag PMM47T1_26478
UniParc UPI00026083CA
UniProtKB Acc I4MWB9
UniProtKB ID I4MWB9_9PSED
UniRef100 UniRef100_I4MWB9
UniRef50 UniRef50_Q48GF7
UniRef90 UniRef90_I4MWB9

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar biosynthesis protein FliR
Synonyms
Evidence for Translation
Charge (pH 7) -1.29
Kyte-Doolittle Hydrophobicity Value 1.112
Molecular Weight (kDa) 28.3
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001365 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMM47T1_26478
Search term: fliR

Human Homologs

References

No references are associated with this feature.