Pseudomonas sp. M47T1, PMM47T1_09796

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. M47T1
GCF_000263855.1|latest
Locus Tag
PMM47T1_09796
Name
Replicon contig06
Genomic location 198577 - 199311 (+ strand)

Cross-References

RefSeq WP_008368148.1
GI 495643569
INSDC EIK96943.1
NCBI Locus Tag PMM47T1_09796
UniParc UPI0002606B61
UniProtKB Acc I4N653
UniProtKB ID I4N653_9PSED
UniRef100 UniRef100_I4N653
UniRef50 UniRef50_G8Q3T8
UniRef90 UniRef90_I4N653

Product

Feature Type CDS
Coding Frame 1
Product Name
lipopolysaccharide core biosynthesis protein
Synonyms
Evidence for Translation
Charge (pH 7) 17.85
Kyte-Doolittle Hydrophobicity Value -0.613
Molecular Weight (kDa) 28.5
Isoelectric Point (pI) 10.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004615 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMM47T1_09796

Human Homologs

References

No references are associated with this feature.