Pseudomonas sp. M47T1, PMM47T1_07091

Gene Feature Overview

Strain	Pseudomonas sp. M47T1 GCF_000263855.1|latest
Locus Tag	PMM47T1_07091
Name
Replicon	contig04
Genomic location	283287 - 283841 (+ strand)

Cross-References

RefSeq	WP_008367144.1
GI	495642565
INSDC	EIK97531.1
NCBI Locus Tag	PMM47T1_07091
UniParc	UPI0002608586
UniProtKB Acc	I4N7U1
UniProtKB ID	I4N7U1_9PSED
UniRef100	UniRef100_I4N7U1
UniRef50	UniRef50_Q88RQ9
UniRef90	UniRef90_I4N7U1

Product

Feature Type	CDS
Coding Frame	1
Product Name	tRNA threonylcarbamoyladenosine biosynthesis protein RimN
Synonyms
Evidence for Translation
Charge (pH 7)	1.65
Kyte-Doolittle Hydrophobicity Value	-0.026
Molecular Weight (kDa)	20.4
Isoelectric Point (pI)	8.23

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000022 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMM47T1_07091 Search term: tRNA threonylcarbamoyladenosine biosynthesis protein RimN

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000362135 yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905] E-value: 1.5e-09 Percent Identity: 26.6

References