Pseudomonas putida LS46, PPUTLS46_020896
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida LS46 - Assembly GCF_000294445.2
GCF_000294445.2|latest |
| Locus Tag |
PPUTLS46_020896
|
| NCBI Locus Tag | PPUTLS46_RS20730 |
| Name |
|
| Replicon | Contig17 |
| Genomic location | 314340 - 315290 (+ strand) |
Cross-References
| RefSeq | WP_003254586.1 |
| GI | 489347464 |
| NCBI Locus Tag | PPUTLS46_RS20730 |
| NCBI Old Locus Tag | PPUTLS46_020896 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
agmatinase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.26 |
| Kyte-Doolittle Hydrophobicity Value | -0.006 |
| Molecular Weight (kDa) | 34.4 |
| Isoelectric Point (pI) | 5.18 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3NIO | HYDROLASE | 06/16/10 | Crystal structure of Pseudomonas aeruginosa guanidinobutyrase | Pseudomonas aeruginosa | 2 | X-RAY DIFFRACTION | 90.3 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001341 (475 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUTLS46_020896
Search term: agmatinase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
agmatinase [Source:HGNC Symbol;Acc:HGNC:18407]
E-value:
9.0e-116
Percent Identity:
63.5
|
References
No references are associated with this feature.