Pseudomonas putida LS46, PPUTLS46_012595
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida LS46 - Assembly GCF_000294445.2
GCF_000294445.2|latest |
| Locus Tag |
PPUTLS46_012595
|
| NCBI Locus Tag | PPUTLS46_RS12525 |
| Name |
|
| Replicon | Contig12 |
| Genomic location | 300235 - 301842 (+ strand) |
Cross-References
| RefSeq | WP_003251468.1 |
| GI | 489344318 |
| NCBI Locus Tag | PPUTLS46_RS12525 |
| NCBI Old Locus Tag | PPUTLS46_012595 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
microcin C ABC transporter ATP-binding protein YejF
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 5.95 |
| Kyte-Doolittle Hydrophobicity Value | -0.082 |
| Molecular Weight (kDa) | 59.1 |
| Isoelectric Point (pI) | 8.11 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003590 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUTLS46_012595
Search term: microcin C ABC transporter ATP-binding protein YejF
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
6.6e-18
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
6.6e-18
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
6.6e-18
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
6.6e-18
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
6.6e-18
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
6.6e-18
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
6.6e-18
Percent Identity:
30.1
|
References
No references are associated with this feature.