Pseudomonas syringae pv. syringae SM, PssSM_2165 (oprF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae SM
GCF_000412165.1|latest |
| Locus Tag |
PssSM_2165
|
| NCBI Locus Tag | PSSSM_RS14960 |
| Name |
oprF
|
| Replicon | chromosome |
| Genomic location | 2457469 - 2458503 (+ strand) |
Cross-References
| RefSeq | WP_003315685.1 |
| GI | 489409692 |
| NCBI Locus Tag | PSSSM_RS14960 |
| NCBI Old Locus Tag | PssSM_2165 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
outer membrane porin OprF
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -14.39 |
| Kyte-Doolittle Hydrophobicity Value | -0.442 |
| Molecular Weight (kDa) | 36.5 |
| Isoelectric Point (pI) | 4.46 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003618 (537 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PssSM_2165
Search term: oprF
Search term: outer membrane porin OprF
|
Human Homologs
References
No references are associated with this feature.