Pseudomonas syringae pv. syringae SM, PssSM_1785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae SM
GCF_000412165.1|latest |
| Locus Tag |
PssSM_1785
|
| NCBI Locus Tag | PSSSM_RS16780 |
| Name |
|
| Replicon | chromosome |
| Genomic location | 1981248 - 1982858 (- strand) |
Cross-References
| RefSeq | WP_016567612.1 |
| GI | 514420449 |
| NCBI Locus Tag | PSSSM_RS16780 |
| NCBI Old Locus Tag | PssSM_1785 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC-type nickel/dipeptide/oligopeptide-type transport system, ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 5.54 |
| Kyte-Doolittle Hydrophobicity Value | -0.069 |
| Molecular Weight (kDa) | 58.9 |
| Isoelectric Point (pI) | 8.47 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003590 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PssSM_1785
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.5e-17
Percent Identity:
30.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.5e-17
Percent Identity:
30.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.5e-17
Percent Identity:
30.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.5e-17
Percent Identity:
30.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.5e-17
Percent Identity:
30.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.5e-17
Percent Identity:
30.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
E-value:
1.5e-17
Percent Identity:
30.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.5e-17
Percent Identity:
30.3
|
References
No references are associated with this feature.