Pseudomonas sp. GM25, PMI24_02553

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM25
GCF_000282255.1|latest
Locus Tag
PMI24_02553
Name
Replicon contig_61.61
Genomic location 274512 - 275012 (+ strand)

Cross-References

RefSeq WP_007954386.1
GI 495229615
INSDC EJM28363.1
NCBI Locus Tag PMI24_02553
UniParc UPI00026FF3F3
UniProtKB Acc J2XIM5
UniProtKB ID J2XIM5_9PSED
UniRef100 UniRef100_J2XIM5
UniRef50 UniRef50_Q9I359
UniRef90 UniRef90_J2XIM5

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.55
Kyte-Doolittle Hydrophobicity Value -0.192
Molecular Weight (kDa) 18.5
Isoelectric Point (pI) 5.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000079 (812 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI24_02553

Human Homologs

References

No references are associated with this feature.