Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0113535 (gyrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_000688275.1
GCF_000688275.1|latest
Locus Tag
Q378_RS0113535
Name
gyrB
Replicon scaffold00012.12_C
Genomic location 38868 - 41288 (+ strand)

Cross-References

RefSeq WP_016394307.1
GI 511761104
NCBI Locus Tag Q378_RS0113535

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA gyrase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -13.48
Kyte-Doolittle Hydrophobicity Value -0.394
Molecular Weight (kDa) 90.1
Isoelectric Point (pI) 5.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000004 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Q378_RS0113535
Search term: gyrB

Human Homologs

Ensembl 110, assembly GRCh38.p14
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value: 7.6e-34
Percent Identity: 26.2

References

No references are associated with this feature.