Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0109230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_000688275.1
GCF_000688275.1|latest
Locus Tag
Q378_RS0109230
Name
Replicon scaffold00006.6_C
Genomic location 245102 - 247699 (- strand)

Cross-References

RefSeq WP_016394657.1
GI 511761457
NCBI Locus Tag Q378_RS0109230

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion ATPase
Synonyms
Evidence for Translation
Charge (pH 7) -14.58
Kyte-Doolittle Hydrophobicity Value -0.158
Molecular Weight (kDa) 94.6
Isoelectric Point (pI) 5.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000089 (1168 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Q378_RS0109230

Human Homologs

Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.2e-38
Percent Identity: 33.4
Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.2e-38
Percent Identity: 33.4
Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.2e-38
Percent Identity: 33.4

References

No references are associated with this feature.