Pseudomonas putida KT2440, PP_5538 (pedA1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida KT2440 (TIGR)
GCF_000007565.2|latest |
| Locus Tag |
PP_5538
|
| Name |
pedA1
|
| Replicon | chromosome |
| Genomic location | 3057378 - 3058571 (- strand) |
| Comment | Essential for PedH-dependent growth under low (nM) concentrations of lanthanides |
Cross-References
| RefSeq | YP_009237013.1 |
| GI | 1002826086 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
PedA1
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.35 |
| Kyte-Doolittle Hydrophobicity Value | -0.177 |
| Molecular Weight (kDa) | 43.3 |
| Isoelectric Point (pI) | 8.44 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group | |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PP_5538
Search term: pedA1
Search term: PedA1
|
Human Homologs
References
|
Rare Earth Element (REE)-Dependent Growth of Pseudomonas putida KT2440 Relies on the ABC-Transporter PedA1A2BC and Is Influenced by Iron Availability.
Wehrmann M, Berthelot C, Billard P, Klebensberger J
Front Microbiol 2019;10:2494
PubMed ID: 31736923
|