Pseudomonas putida KT2440, PP_5538 (pedA1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13458 | Periplasmic binding protein | IPR028081 | Leucine-binding protein domain | 59 | 362 | 2.6E-9 |
| PANTHER | PTHR30483 | LEUCINE-SPECIFIC-BINDING PROTEIN | - | - | 12 | 362 | 7.7E-16 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 160 | 360 | 5.0E-10 |
| CDD | cd06268 | PBP1_ABC_transporter_LIVBP-like | - | - | 52 | 312 | 6.97077E-15 |
| SUPERFAMILY | SSF53822 | Periplasmic binding protein-like I | IPR028082 | Periplasmic binding protein-like I | 53 | 362 | 1.38E-22 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 60 | 356 | 5.0E-10 |
| NCBIfam | TIGR03863 | JCVI: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system | IPR022478 | ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system | 52 | 394 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.