Pseudomonas aeruginosa NCGM2.S1, NCGM2_RS09970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa NCGM2.S1
GCF_000284555.1|latest |
| Locus Tag |
NCGM2_RS09970
|
| Name |
Synonym: NCGM2_2003 |
| Replicon | chromosome |
| Genomic location | 2159486 - 2160754 (- strand) |
Cross-References
| RefSeq | WP_003086509.1 |
| GI | 489176990 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
tetracycline resistance MFS efflux pump
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 13.22 |
| Kyte-Doolittle Hydrophobicity Value | 0.859 |
| Molecular Weight (kDa) | 44.4 |
| Isoelectric Point (pI) | 10.49 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001091 (306 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: NCGM2_RS09970
Search term: tetracycline resistance MFS efflux pump
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
major facilitator superfamily domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16894]
E-value:
1.8e-10
Percent Identity:
30.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
major facilitator superfamily domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16894]
E-value:
1.8e-10
Percent Identity:
30.7
|
References
No references are associated with this feature.