Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS17215
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas resinovorans NBRC 106553
GCF_000412695.1|latest |
| Locus Tag |
PCA10_RS17215
|
| Name |
Synonym: PCA10_34700 |
| Replicon | NBRC 106553 DNA, complete geonome |
| Genomic location | 3823717 - 3824880 (+ strand) |
Cross-References
| RefSeq | WP_016493346.1 |
| GI | 512735508 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
isovaleryl-CoA dehydrogenase LiuA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.46 |
| Kyte-Doolittle Hydrophobicity Value | -0.318 |
| Molecular Weight (kDa) | 42.6 |
| Isoelectric Point (pI) | 5.72 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003424 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PCA10_RS17215
Search term: isovaleryl-CoA dehydrogenase LiuA
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186]
E-value:
9.3e-139
Percent Identity:
63.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186]
E-value:
9.3e-139
Percent Identity:
63.3
|
References
No references are associated with this feature.