Pseudomonas resinovorans CA10 (NBRC 106553)

Strain Overview
Organism Name Pseudomonas resinovorans NBRC 106553
Species Pseudomonas resinovorans
Strain CA10 (NBRC 106553)
Description/Title Generic sample from Pseudomonas resinovorans NBRC 106553
Annotated Genes 5816
Partial Genes 23
Host Information
Geographic Location
Environmental Material (?) activated sludge
Sample Provider
Name
E-mail
Institution DDBJ
Date Collected

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000412695.1
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Gapless Chromosome
Percent GC 65.3177
Cross-References
NCBI BioSample Accession SAMD00061053
NCBI Taxonomy ID 1245471
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas resinovorans NBRC 106553 DNA, complete geonome.
Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3 DNA, complete genome.

Annotated Features

Feature Count
gene 5776
CDS 5687
tRNA 71
pseudo 40
rRNA 16
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2659
Cytoplasmic Membrane 1252
Periplasmic 182
Outer Membrane 146
Extracellular 50
Unknown 1201
Unknown (This protein may have multiple localization sites) 197
Flagellar 34
Fimbrial 3

Replicons

Name Length GC
Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. 6285863 bp 65.6%
Replicon details
Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3 DNA, complete genome. 198965 bp 56.4%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF