Pseudomonas trivialis IHBB745, AA957_RS16610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas trivialis IHBB745
GCF_001186335.1|latest |
| Locus Tag |
AA957_RS16610
|
| Name |
Synonym: AA957_16620 |
| Replicon | chromosome |
| Genomic location | 3699612 - 3701315 (- strand) |
Cross-References
| RefSeq | WP_049711179.1 |
| GI | 903247135 |
| EC Number | 1.1.99.1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
choline dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.31 |
| Kyte-Doolittle Hydrophobicity Value | -0.457 |
| Molecular Weight (kDa) | 62.8 |
| Isoelectric Point (pI) | 6.12 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004937 (526 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: AA957_RS16610
Search term: choline dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
choline dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24288]
E-value:
6.8e-146
Percent Identity:
50.5
|
References
No references are associated with this feature.