Pseudomonas syringae pv. tomato NYS-T1, NB04_RS20495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. tomato NYS-T1
GCF_000765305.1|latest |
| Locus Tag |
NB04_RS20495
|
| Name |
Synonym: NB04_20490 |
| Replicon | Contig19 |
| Genomic location | 12064 - 12795 (+ strand) |
Cross-References
| RefSeq | WP_007246241.1 |
| GI | 494456405 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
short-chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.53 |
| Kyte-Doolittle Hydrophobicity Value | 0.345 |
| Molecular Weight (kDa) | 25.5 |
| Isoelectric Point (pI) | 5.04 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000180 (2633 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: NB04_RS20495
Search term: short-chain dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
E-value:
9.0e-23
Percent Identity:
33.5
|
References
No references are associated with this feature.