Pseudomonas syringae pv. syringae B301D, PSYRB_RS25525
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B301D
GCF_000988485.1|latest |
| Locus Tag |
PSYRB_RS25525
|
| Name |
Synonym: PsyrB_26090 |
| Replicon | chromosome |
| Genomic location | 5910123
- 5913950
(+ strand)
Partial sequence -> 3' end. |
Cross-References
| RefSeq | WP_032657323.1 |
| GI | 695730795 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type IV secretion protein Rhs
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -25.58 |
| Kyte-Doolittle Hydrophobicity Value | -0.518 |
| Molecular Weight (kDa) | 143.7 |
| Isoelectric Point (pI) | 5.86 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000092 (1670 members) |
| Putative Inparalogs |
1 predicted inparalogs hypothetical protein (PSYRB_RS25535) 96.3% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSYRB_RS25525
Search term: type IV secretion protein Rhs
|
Human Homologs
References
No references are associated with this feature.