Pseudomonas syringae pv. syringae B301D, PSYRB_RS00085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B301D
GCF_000988485.1|latest |
| Locus Tag |
PSYRB_RS00085
|
| Name |
Synonym: PsyrB_00085 |
| Replicon | chromosome |
| Genomic location | 20712 - 22037 (- strand) |
Cross-References
| RefSeq | WP_024641173.1 |
| GI | 639466438 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
16S rRNA methyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.85 |
| Kyte-Doolittle Hydrophobicity Value | -0.083 |
| Molecular Weight (kDa) | 47.8 |
| Isoelectric Point (pI) | 6.84 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000017 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSYRB_RS00085
Search term: 16S rRNA methyltransferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.4e-26
Percent Identity:
32.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.4e-26
Percent Identity:
32.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.4e-26
Percent Identity:
32.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.4e-26
Percent Identity:
32.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.4e-26
Percent Identity:
32.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.4e-26
Percent Identity:
32.3
|
References
No references are associated with this feature.