Pseudomonas syringae CC1557, N018_RS19865
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae CC1557
GCF_000452705.1|latest |
| Locus Tag |
N018_RS19865
|
| Name |
Synonym: N018_20305 |
| Replicon | chromosome |
| Genomic location | 4498242 - 4499696 (+ strand) |
Cross-References
| RefSeq | WP_024645639.1 |
| GI | 639472069 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent RNA helicase RhlB
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.93 |
| Kyte-Doolittle Hydrophobicity Value | -0.390 |
| Molecular Weight (kDa) | 53.8 |
| Isoelectric Point (pI) | 6.71 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001808 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: N018_RS19865
Search term: ATP-dependent RNA helicase RhlB
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
1.3e-65
Percent Identity:
39.2
|
References
No references are associated with this feature.