Pseudomonas stutzeri 19SMN4, UIB01_RS07935
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri 19SMN4
GCF_000661915.1|latest |
| Locus Tag |
UIB01_RS07935
|
| Name |
Synonym: UIB01_08070 |
| Replicon | chromosome |
| Genomic location | 1692916 - 1693677 (+ strand) |
Cross-References
| RefSeq | WP_038658596.1 |
| GI | 740873348 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
short-chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.43 |
| Kyte-Doolittle Hydrophobicity Value | 0.275 |
| Molecular Weight (kDa) | 26.0 |
| Isoelectric Point (pI) | 5.10 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000180 (2633 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: UIB01_RS07935
Search term: short-chain dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value:
2.8e-27
Percent Identity:
32.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value:
2.8e-27
Percent Identity:
32.0
|
References
No references are associated with this feature.