Pseudomonas sp. MT-1, MT1_RS12200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. MT-1
GCF_000828755.1|latest |
| Locus Tag |
MT1_RS12200
|
| Name |
Synonym: MT1_2451 |
| Replicon | chromosome |
| Genomic location | 2717098 - 2718765 (- strand) |
Cross-References
| RefSeq | WP_045427326.1 |
| GI | 779989563 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
nuclease
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.28 |
| Kyte-Doolittle Hydrophobicity Value | -0.285 |
| Molecular Weight (kDa) | 63.6 |
| Isoelectric Point (pI) | 6.97 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003538 (532 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: MT1_RS12200
Search term: nuclease
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
3.5e-14
Percent Identity:
30.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
3.5e-14
Percent Identity:
30.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
3.5e-14
Percent Identity:
30.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
3.5e-14
Percent Identity:
30.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
3.5e-14
Percent Identity:
30.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
3.5e-14
Percent Identity:
30.5
|
References
No references are associated with this feature.