Pseudomonas sp. KG01, ACR52_RS27270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. KG01
GCF_001050345.1|latest |
| Locus Tag |
ACR52_RS27270
|
| Name |
Synonym: ACR52_27305 |
| Replicon | sole5_c63 |
| Genomic location | 2172 - 3362 (- strand) |
Cross-References
| RefSeq | WP_048731286.1 |
| GI | 881010520 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
MFS transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 7.54 |
| Kyte-Doolittle Hydrophobicity Value | 0.814 |
| Molecular Weight (kDa) | 41.6 |
| Isoelectric Point (pI) | 9.42 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| tet(C) | Tet(C) is a tetracycline efflux pump found in many species of Gram-negative bacteria. It is typically found in plasmid DNA. [PMID:6307828] | ARO:3000167 | protein homolog model | Strict | 749.6 | 99.49 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001091 (306 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: ACR52_RS27270
Search term: MFS transporter
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
novel protein
E-value:
1.2e-24
Percent Identity:
27.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
major facilitator superfamily domain containing 14A [Source:HGNC Symbol;Acc:HGNC:23363]
E-value:
1.2e-24
Percent Identity:
27.6
|
References
No references are associated with this feature.