Pseudomonas sp. FeS53a, SZ55_RS08900
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. FeS53a
GCF_000931385.1|latest |
| Locus Tag |
SZ55_RS08900
|
| Name |
Synonym: SZ55_1788 |
| Replicon | scaffold59.1 |
| Genomic location | 4419 - 4928 (+ strand) |
Cross-References
| RefSeq | WP_044404380.1 |
| GI | 764520728 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
RNA polymerase sigma factor
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.31 |
| Kyte-Doolittle Hydrophobicity Value | -0.147 |
| Molecular Weight (kDa) | 19.0 |
| Isoelectric Point (pI) | 7.11 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000463 (1798 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: SZ55_RS08900
Search term: RNA polymerase sigma factor
|
Human Homologs
References
No references are associated with this feature.