Pseudomonas sp. FeS53a, SZ55_RS15000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. FeS53a
GCF_000931385.1|latest |
| Locus Tag |
SZ55_RS15000
|
| Name |
Synonym: SZ55_3021 |
| Replicon | scaffold12.1 |
| Genomic location | 39293 - 41233 (+ strand) |
Cross-References
| RefSeq | WP_044407544.1 |
| GI | 764528227 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein ImpA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.34 |
| Kyte-Doolittle Hydrophobicity Value | -0.574 |
| Molecular Weight (kDa) | 72.3 |
| Isoelectric Point (pI) | 6.10 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000090 (3342 members) |
| Putative Inparalogs |
1 predicted inparalogs type VI secretion protein ImpA (SZ55_RS15060) 84.9% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: SZ55_RS15000
Search term: type VI secretion protein ImpA
|
Human Homologs
References
No references are associated with this feature.