Pseudomonas sp. DSM 28140, TU87_RS08050
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. DSM 28140
GCF_001042975.1|latest |
| Locus Tag |
TU87_RS08050
|
| Name |
Synonym: TU87_08040 |
| Replicon | contig_32 |
| Genomic location | 219860 - 221668 (- strand) |
Cross-References
| RefSeq | WP_048364476.1 |
| GI | 860273508 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
lipid transporter ATP-binding/permease
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 5.38 |
| Kyte-Doolittle Hydrophobicity Value | 0.173 |
| Molecular Weight (kDa) | 66.5 |
| Isoelectric Point (pI) | 8.86 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004607 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: TU87_RS08050
Search term: lipid transporter ATP-binding/permease
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value:
1.6e-81
Percent Identity:
35.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value:
1.6e-81
Percent Identity:
35.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value:
1.6e-81
Percent Identity:
35.0
|
References
No references are associated with this feature.