Pseudomonas sp. 21, UB43_RS18435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. 21
GCF_000955805.1|latest |
| Locus Tag |
UB43_RS18435
|
| Name |
Synonym: UB43_18425 |
| Replicon | contig7 |
| Genomic location | 630939 - 632045 (- strand) |
Cross-References
| RefSeq | WP_017518853.1 |
| GI | 516088273 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DNA polymerase III subunit beta
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.84 |
| Kyte-Doolittle Hydrophobicity Value | -0.116 |
| Molecular Weight (kDa) | 40.6 |
| Isoelectric Point (pI) | 4.82 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6AMS | TRANSFERASE | 08/11/17 | Crystal structure of the DNA polymerase III subunit beta from Pseudomonas aeruginosa | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 2.39 | X-RAY DIFFRACTION | 92.9 |
| 4TR8 | DNA BINDING PROTEIN | 06/15/14 | Crystal structure of DNA polymerase sliding clamp from Pseudomonas aeruginosa | Pseudomonas aeruginosa HB15 | 1.8 | X-RAY DIFFRACTION | 92.9 |
| 6PTH | TRANSFERASE/ANTIBIOTIC | 07/15/19 | Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Pseudomonas aeruginosa bound to griselimycin | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT | 3.05 | X-RAY DIFFRACTION | 92.9 |
| 4TSZ | TRANSFERASE | 06/19/14 | Crystal structure of DNA polymerase sliding clamp from Pseudomonas aeruginosa with ligand | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 2 | X-RAY DIFFRACTION | 92.9 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000002 (538 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: UB43_RS18435
Search term: DNA polymerase III subunit beta
|
Human Homologs
References
No references are associated with this feature.