Pseudomonas sp. 21, UB43_RS18435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 21 contig7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGGCCAAGGTCGAACTGCCGCACGATGCCGCGTTCTTCATCGCCCAGCGCATCCGTTCCAACGTGCGCGAGCTGGAAGGTGCGCTCAAGCGCGTGATTG CCCATTCCCACTTCATGGGCCGGCCGATCACCATCGAGCTGATCCGCGAGTCGCTGAAGGACCTGCTGGCCCTGCAGGACAAGCTGGTCAGCATCGACAA CATCCAGCGCACCGTCGCCGAGTATTACAAGATCAAGATCGCCGACCTGCTGTCCAAGCGCCGTTCGCGCTCGGTGGCGCGTCCGCGCCAGGTTGCCATG GCACTGTCCAAGGAACTGACCAACCACAGCCTGCCGGAGATCGGCGTGGCCTTCGGCGGTCGGGATCACACCACGGTGCTGCACGCCTGTCGTAAGATCG CTCAACTCAAGGAATCCGACGCGGATATCCGCGAGGACTACAAGAACCTGCTGCGTACTCTGACCACCTGACGCAGCCTCACGAGGCAAGGGACTAGACC
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| DNA Sequence for Gene |
>UB43_RS18435
ATGCATTTCACTATTCAACGCGAAGCTCTGTTGAAACCCCTGCAGCTGGTCGCTGGCGTCGTCGAGCGCCGCCAGACGCTGCCGGTTCTTTCCAACGTCC TGCTGGTCGTCGAAGGTCAGCAACTGTCGCTTACCGGTACCGACCTCGAAGTCGAACTGGTTGGCCGTGTCACGCTGGAAGACGCCGCTGAGCCGGGCGA AATCACCGTGCCGGCGCGCAAGCTGATGGACATCTGCAAGAGCCTGCCCAGCGATGCCGTTATCGATATCCGCGTCGACGAGCAGAAGCTCCTGGTGAAA GCCGGCCGTAGCCGCTTCACCCTCTCCACACTGCCCGCCAATGATTTCCCCACGGTGGAAGAAGGCCCGGGCTCGCTGACCTTCAGCCTGGTCCAGAGCA AGCTGCGTCGCCTGATCGATCGCACCAGCTTTGCCATGGCGCAGCAGGATGTTCGTTACTACCTGAACGGCATGCTGCTGGAAGTGGGCGGCGGTACCCT GCGTGCCGTGGCCACCGACGGCCACCGCCTGGCCATGTGCTCGCTGAGCAACGGTGTGCCGGAAGCACAGGATCGCCACCAGGTGATCGTGCCGCGCAAA GGCATCCTTGAACTGGCTCGCCTGCTCACCGAGCAGGACGGCGAAGTGTCCATCGTCCTTGGGCAGCACCACATCCGTGCGACCACTGGCGAGTTCACCT TCACCTCCAAGCTGGTGGACGGCAAGTTCCCGGATTACGAGCGCGTGCTGCCCAAGGGCGGTGACAAGCTGGTGCTGGGTGATCGCCAGGTGCTGCGCGA AGCCTTCAGCCGCACCGCGATCCTGTCCAACGAAAAGTACCGCGGTATCCGTCTGCAACTCTCCAACGGCCTCCTGAAAATCCAGGCGAACAACCCGGAA CAGGAAGAGGCGGAAGAAGAAGTGCAGGTCGACTACAACGGCGGCAGCCTGGAAATCGGCTTCAACGTCAGCTATCTGCTGGACGTCCTGGGCGTGATGG GTACCGAGCAGGTACGCATGATCCTCTCTGACTCCAACAGCAGTGCGCTGCTGCAGGAAGCGGACAACGACGATTCTGCCTACGTCGTCATGCCGATGCG CCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCGTATCGATGTCCCTTACCCGCCTTTCGGTCACCGCGGTGCGTAACCTGCACCCGGTGACCTTCTCCCCCTCCCCCCGCATCAACATCCTCTACGGCG AAAACGGCAGCGGCAAGACCAGCGTGCTGGAAGCCATCCATCTGCTCGGCCTCGCTCGTTCGTTCCGCAGCATGCGCCTTCAACCTGTCATCCAGTACGA AGAACCGGCTTGCACCGTCTTTGGACAGGTGCGTCTGGGTAATGGCTTCGATAGCAGCCTGGGTGTTTCGCGGGATCGCCAGGGCGAGTTCCAGATTCGT ATCGATGGGCAAAATGCACGCAGTGCTGCCCAGCTTGCCGAGACCTTGCCGCTGCAGTTGATCAACCCTGACAGCTTTCGTCTGCTGGAAGGTGCGCCGA AGATTCGCCGGCAGTTCCTCGACTGGGGAGTGTTCCACGTGGAACAGCGCTTCATGGTCGCCTGGCAAAGACTGCAGAAGGCCCTGCGGCAGCGGAACTC
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| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVTLEDAAEPGEITVPARKLMDICKSLPSDAVIDIRVDEQKLLVK AGRSRFTLSTLPANDFPTVEEGPGSLTFSLVQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVGGGTLRAVATDGHRLAMCSLSNGVPEAQDRHQVIVPRK GILELARLLTEQDGEVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVLGDRQVLREAFSRTAILSNEKYRGIRLQLSNGLLKIQANNPE QEEAEEEVQVDYNGGSLEIGFNVSYLLDVLGVMGTEQVRMILSDSNSSALLQEADNDDSAYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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