Pseudomonas sp. 10B238, RT21_RS17945
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. 10B238
GCF_000970615.1|latest |
| Locus Tag |
RT21_RS17945
|
| Name |
Synonym: RT21_17965 |
| Replicon | scaffold12 |
| Genomic location | 122943 - 123680 (- strand) |
Cross-References
| RefSeq | WP_046163811.1 |
| GI | 806804395 |
| EC Number | 2.4.2.28 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
5'-methylthioadenosine phosphorylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.24 |
| Kyte-Doolittle Hydrophobicity Value | 0.131 |
| Molecular Weight (kDa) | 26.3 |
| Isoelectric Point (pI) | 6.37 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002578 (423 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RT21_RS17945
Search term: 5'-methylthioadenosine phosphorylase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]
E-value:
3.5e-06
Percent Identity:
26.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]
E-value:
3.5e-06
Percent Identity:
26.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]
E-value:
3.5e-06
Percent Identity:
26.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]
E-value:
3.5e-06
Percent Identity:
26.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]
E-value:
3.5e-06
Percent Identity:
26.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]
E-value:
3.5e-06
Percent Identity:
26.4
|
References
No references are associated with this feature.