Pseudomonas simiae 2-36, LS88_RS00005
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas simiae 2-36
GCF_000785125.1|latest |
| Locus Tag |
LS88_RS00005
|
| Name |
|
| Replicon | scaffold1.1 |
| Genomic location | 1
- 1247
(- strand)
Partial sequence -> 3' end. |
Cross-References
| RefSeq | WP_047540183.1 |
| GI | 835528198 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ribonucleotide-diphosphate reductase subunit beta
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -19.47 |
| Kyte-Doolittle Hydrophobicity Value | -0.333 |
| Molecular Weight (kDa) | 47.2 |
| Isoelectric Point (pI) | 4.59 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001114 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: LS88_RS00005
Search term: ribonucleotide-diphosphate reductase subunit beta
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ribonucleotide reductase regulatory TP53 inducible subunit M2B [Source:HGNC Symbol;Acc:HGNC:17296]
E-value:
2.7e-35
Percent Identity:
27.5
|
References
No references are associated with this feature.