Pseudomonas plecoglossicida NyZ12, RK21_RS04605
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas plecoglossicida NyZ12
GCF_000831585.1|latest |
| Locus Tag |
RK21_RS04605
|
| Name |
Synonym: RK21_00952 |
| Replicon | chromosome |
| Genomic location | 1043193 - 1044803 (- strand) |
Cross-References
| RefSeq | WP_023661221.1 |
| GI | 563364960 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
microcin C ABC transporter ATP-binding protein YejF
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 7.43 |
| Kyte-Doolittle Hydrophobicity Value | -0.107 |
| Molecular Weight (kDa) | 59.5 |
| Isoelectric Point (pI) | 8.38 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003590 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RK21_RS04605
Search term: microcin C ABC transporter ATP-binding protein YejF
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
3.9e-18
Percent Identity:
30.4
|
References
No references are associated with this feature.