Pseudomonas plecoglossicida NyZ12, RK21_RS04605

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCCGGGCAACGCTTCCTGGAAGTCTGGTCGGGCCTGCCGGTGCTGTACCTGCTGATCATCCTCGCCAGCTTCGTGCAGCCCAACTTCTGGTGGTTGCTG GGCATCATGCTGCTGTTCTCGTGGATGAGCCTGGTGGACGTGGTGCGCGCCGAGTTCCTGCGCGGGCGCAACCTGGAATACGTACGTGCCGCCCGCGCCC TGGGCATGCGCAATGGCGCGATCATGTACCGGCATATCCTGCCCAACGCCATGATCTCGACCATGACCTTCATGCCATTCATTCTCACCGGCGCCATCGG CACCCTCACCGCCCTGGACTTCCTCGGCTTCGGCCTGCCGCCGGGCGCACCGTCGCTGGGCGAGCTGGTGGCCCAGGGCAAGTCCAACCTGCAGGCCCCA TGGCTGGGCATCAGCGCCTTCGCCGTGCTGGCGCTGATGCTGAGCCTGCTGGTGTTCATCGGCGAATCCGCCCGCGATGCCTTCGACCCGAGGAAGTGAC
DNA Sequence for Gene
>RK21_RS04605
ATGAGTGAACAGAACCTGATCGAAGTGCGCGACCTGGCGGTGGAGTTCGTCACCGGGGACCAGGCCCACCGCGTTGTGAACGGCATCAGCTTCGACATCC GCAAGGGTGAGACGCTGGCACTGGTGGGCGAGAGTGGCTCGGGCAAATCGGTTACCGCGCACTCGCTCCTGCGCCTGCTGCCCTACCCCCTGGCCCGCCA CCCCAGCGGCAGCATCCGCTACGAGGGCAAGGACCTGCTGCAGCAGAACGAGAAGACCATGCAGCGCATTCGCGGCAACCGCATTGCAATGATCTTCCAG GAGCCGATGACCTCGCTTAACCCGCTGCACTGCATCGAGAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACCGGCAAGGAGGCCACGGCGC GCACCCTGGAGCTGCTGGAGATGGTCGGCATTCCCGAGCCACGCAAGCGTCTGAAGGCTTTGCCCCATGAGCTATCGGGCGGGCAGCGCCAGCGGGTGAT GATCGCCATGGCCCTGGCCAACGAGCCCGAACTGCTGATTGCGGATGAGCCGACCACGGCGCTGGACGTGACTGTGCAGTTGAAGATTCTCGAACTGCTC AAGGAACTGCAGGCGCGTCTGGGCATGGCCCTGCTGCTGATCAGCCATGACCTGAACCTGGTGCGACGCATCGCCCACCGTGTGTGCGTGATGCAGCACG GGCAGATTGTCGAGCAGGCCGAATGCGCCAGGTTGTTCAGCGCACCGCAGCACCACTACACGCAGATGCTGATCAATGCCGAACCCAGCGGGCTGCCGGC GCACAACCCGGTGGGCGCGCCATTGCTGGAGGTGGATGACCTCAAGGTGTGGTTCCCGATCAAGAAGGGCCTGCTACGGCGCACGGTCGACCATGTGAAG GCGGTGGACGGGATCAACTTCAGCTTGCCGCAAGGGCAGACGCTGGGGATTGTCGGCGAGTCCGGGTCGGGCAAGTCGACTTTGGGTTTGGCGATCTTGC GGCTGATCTCCAGCCAGGGCGGCATTCGCTTTCATGGGCAGGATCTGGAAGGGCTGAACCAGAAGGCCGTGCGCCCGTTGCGCCGGGAAATGCAGGTGGT GTTCCAGGACCCGTTCGGCAGCCTGAGCCCGCGCATGTGCGTGGAGGACATTGTCGGCGAAGGGTTGCGCATCCACCGCATCGGCACGGCGCAGGAACAG GAAGCAGCGATTATTGCGGCCTTGGAGGAAGTGGGGCTGGACCCACGCACGCGGCATCGCTATCCGCACGAGTTTTCCGGTGGGCAGCGCCAGCGCATTG CCATTGCCCGGGCGTTGGTATTGAAGCCGGCGCTGATCCTGCTGGATGAACCTACGTCGGCGCTGGACCGCACGGTGCAGCGGCAGGTGGTGGAGTTGCT GCGCAATCTGCAGCAGAAATACAACCTGACCTACCTGTTCATCAGCCATGACCTGGCGGTGGTCAAGGCATTGAGCCACCAGTTGATGGTGATCAAGCAT GGGCATGTGGTGGAGCAAGGGGATGCACAGGCGATCTTCCATGCGCCGCAGCATCCGTATACCCGGCAGTTGCTGCAGGCGGCGTTCTTGGAAGTGGATG CGGCTAGTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTTTTGACCGCGCCGGCTTCAAGCCATGCGCTATCCCTGTGGGAGCTGGCTTGCCGGCGATGGGCCGCAAAGCGGCCCGCTTTCGGCGAGGTAAAAAACA GACTTATCCCCTTCCTTGTAGGCCATTTCCCAAACATACTCCTGCCGCGTGTTTTCCGTTGCGGCTGCTCTGGCTGGGCTCTAGTCTCGATTGGTCGCTG AAGATCAGCGATACAGCTTTGACAGGCTGTGACGGTTAATTCACGCAGGCAGTCTCCGCTTCATGGTGGCTGTGCGTGTGGGCACGCTTGCGTGCGCCGG AACTTTTGCGTGATTTACCGCCGGTCTGTCAACCCACGTACAGCTGCCACCCGACTGTTTGACAGCAGACAGGCGGCCGCACAGCCAATGGTTAATCACG ATGCTGAAGATTGTCCCCGATCCAACCCACACCCCCCATTCCCTCGAAGACACCCTGATCCAGGCCACCGACTACGCGCTATGCGCGGCCACCGTGGTGC
Amino Acid Sequence
>microcin C ABC transporter ATP-binding protein YejF
MSEQNLIEVRDLAVEFVTGDQAHRVVNGISFDIRKGETLALVGESGSGKSVTAHSLLRLLPYPLARHPSGSIRYEGKDLLQQNEKTMQRIRGNRIAMIFQ EPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLEMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELL KELQARLGMALLLISHDLNLVRRIAHRVCVMQHGQIVEQAECARLFSAPQHHYTQMLINAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGLLRRTVDHVK AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIRFHGQDLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVEDIVGEGLRIHRIGTAQEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKH GHVVEQGDAQAIFHAPQHPYTRQLLQAAFLEVDAAS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site