Pseudomonas mendocina NBRC 14162, PME1_RS01000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina NBRC 14162
GCF_000813265.1|latest |
| Locus Tag |
PME1_RS01000
|
| Name |
|
| Replicon | contig_22 |
| Genomic location | 223188 - 224522 (- strand) |
Cross-References
| RefSeq | WP_041975632.1 |
| GI | 754583574 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.34 |
| Kyte-Doolittle Hydrophobicity Value | 0.027 |
| Molecular Weight (kDa) | 48.6 |
| Isoelectric Point (pI) | 5.80 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000078 (854 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PME1_RS01000
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.