Pseudomonas mendocina NBRC 14162, PME1_RS00085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina NBRC 14162
GCF_000813265.1|latest |
| Locus Tag |
PME1_RS00085
|
| Name |
|
| Replicon | contig_22 |
| Genomic location | 17551 - 18309 (+ strand) |
Cross-References
| RefSeq | WP_013717811.1 |
| GI | 503483150 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 7.14 |
| Kyte-Doolittle Hydrophobicity Value | -0.025 |
| Molecular Weight (kDa) | 27.7 |
| Isoelectric Point (pI) | 9.89 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001312 (602 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PME1_RS00085
Search term: ABC transporter
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 7 [Source:HGNC Symbol;Acc:HGNC:37]
E-value:
7.4e-20
Percent Identity:
29.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 7 [Source:HGNC Symbol;Acc:HGNC:37]
E-value:
7.4e-20
Percent Identity:
29.8
|
References
No references are associated with this feature.