Pseudomonas fluorescens C1, VC33_RS15550
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens C1
GCF_000967945.1|latest |
| Locus Tag |
VC33_RS15550
|
| Name |
Synonym: VC33_15545 |
| Replicon | contig_12 |
| Genomic location | 203253 - 204506 (+ strand) |
Cross-References
| RefSeq | WP_046030867.1 |
| GI | 802112362 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
sugar ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.71 |
| Kyte-Doolittle Hydrophobicity Value | -0.121 |
| Molecular Weight (kDa) | 46.2 |
| Isoelectric Point (pI) | 6.63 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001312 (602 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: VC33_RS15550
Search term: sugar ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value:
1.5e-17
Percent Identity:
27.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value:
1.5e-17
Percent Identity:
27.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value:
1.5e-17
Percent Identity:
27.7
|
References
No references are associated with this feature.