Pseudomonas chlororaphis UFB2 isolate Soil, VM99_RS27755

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas chlororaphis UFB2 isolate Soil
GCF_001023535.1|latest
Locus Tag
VM99_RS27755
Name
Synonym: VM99_27755
Replicon chromosome
Genomic location 6354120 - 6355385 (- strand)

Cross-References

RefSeq WP_047739388.1
GI 836582067

Product

Feature Type CDS
Coding Frame 1
Product Name
sugar ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.57
Kyte-Doolittle Hydrophobicity Value -0.215
Molecular Weight (kDa) 47.2
Isoelectric Point (pI) 7.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001312 (602 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: VM99_RS27755

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 3.3e-20
Percent Identity: 27.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 3.3e-20
Percent Identity: 27.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 3.3e-20
Percent Identity: 27.7

References

No references are associated with this feature.