Pseudomonas chlororaphis subsp. aurantiaca JD37, JM49_RS29050
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis subsp. aurantiaca JD37
GCF_000761195.1|latest |
| Locus Tag |
JM49_RS29050
|
| Name |
Synonym: JM49_29620 |
| Replicon | chromosome |
| Genomic location | 6480436 - 6482121 (- strand) |
Cross-References
| RefSeq | WP_038584035.1 |
| GI | 740798752 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ShlB family hemolysin secretion/activation protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.39 |
| Kyte-Doolittle Hydrophobicity Value | -0.558 |
| Molecular Weight (kDa) | 62.8 |
| Isoelectric Point (pI) | 6.60 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG213140 (2 members) |
| Putative Inparalogs |
3 predicted inparalogs ShlB family hemolysin secretion/activation protein (JM49_RS04370) 99.8% identity ShlB family hemolysin secretion/activation protein (JM49_RS02485) 99.6% identity ShlB family hemolysin secretion/activation protein (JM49_RS04370) 99.8% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: JM49_RS29050
Search term: ShlB family hemolysin secretion/activation protein
|
Human Homologs
References
No references are associated with this feature.