Pseudomonas chlororaphis subsp. aurantiaca JD37, JM49_RS02485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis subsp. aurantiaca JD37
GCF_000761195.1|latest |
| Locus Tag |
JM49_RS02485
|
| Name |
Synonym: JM49_02520 |
| Replicon | chromosome |
| Genomic location | 548312 - 549997 (- strand) |
Cross-References
| RefSeq | WP_038583447.1 |
| GI | 740798164 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ShlB family hemolysin secretion/activation protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.39 |
| Kyte-Doolittle Hydrophobicity Value | -0.549 |
| Molecular Weight (kDa) | 62.7 |
| Isoelectric Point (pI) | 6.60 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000040 (1614 members) |
| Putative Inparalogs |
2 predicted inparalogs ShlB family hemolysin secretion/activation protein (JM49_RS29050) 99.6% identity ShlB family hemolysin secretion/activation protein (JM49_RS16870) 99.4% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: JM49_RS02485
Search term: ShlB family hemolysin secretion/activation protein
|
Human Homologs
References
No references are associated with this feature.