Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS22180
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas amygdali pv. tabaci ATCC 11528 - Assembly GCF_001006455.1
GCF_001006455.1|latest |
| Locus Tag |
AAY86_RS22180
|
| Name |
Synonym: AAY86_22165 |
| Replicon | scaffold9.1 |
| Genomic location | 354245 - 355591 (+ strand) |
Cross-References
| RefSeq | WP_005743946.1 |
| GI | 492088014 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
16S rRNA methyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.90 |
| Kyte-Doolittle Hydrophobicity Value | -0.092 |
| Molecular Weight (kDa) | 48.4 |
| Isoelectric Point (pI) | 7.21 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000017 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: AAY86_RS22180
Search term: 16S rRNA methyltransferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.9e-26
Percent Identity:
32.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.9e-26
Percent Identity:
32.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.9e-26
Percent Identity:
32.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.9e-26
Percent Identity:
32.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.9e-26
Percent Identity:
32.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.9e-26
Percent Identity:
32.1
|
References
No references are associated with this feature.